mobr - Measurement of Biodiversity
Functions for calculating metrics for the measurement biodiversity and its changes across scales, treatments, and gradients. The methods implemented in this package are described in: Chase, J.M., et al. (2018) <doi:10.1111/ele.13151>, McGlinn, D.J., et al. (2019) <doi:10.1111/2041-210X.13102>, McGlinn, D.J., et al. (2020) <doi:10.1101/851717>, and McGlinn, D.J., et al. (2023) <doi:10.1101/2023.09.19.558467>.
Last updated 21 days ago
biodiversityconservationecologyrarefactionspeciesstatistics
8.64 score 23 stars 90 scripts 226 downloadsmobsim - Spatial Simulation and Scale-Dependent Analysis of Biodiversity Changes
Simulation, analysis and sampling of spatial biodiversity data (May, Gerstner, McGlinn, Xiao & Chase 2017) <doi:10.1111/2041-210x.12986>. In the simulation tools user define the numbers of species and individuals, the species abundance distribution and species aggregation. Functions for analysis include species rarefaction and accumulation curves, species-area relationships and the distance decay of similarity.
Last updated 6 months ago
biodiversitymacroecologypoint-pattern-analysisrarefactionsimulationspeciesspecies-abundance-distributions
7.75 score 20 stars 75 scripts 184 downloads